Question: Phasing a portion of chromosome vs whole chromosome using Beagle?
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gravatar for alek0991
3.4 years ago by
alek09910
United States
alek09910 wrote:

I need to phase a gene region (around 100Kbp)  in chromosome 13 using Beagle. Does it influence the accuracy of phasing if I just give this 100kbp region as input to the Beagle (Not the whole chromosome 13)?

beagle phasing snp • 1.0k views
ADD COMMENTlink modified 3.3 years ago by Biostar ♦♦ 20 • written 3.4 years ago by alek09910
1

Might be a good idea to add 1Mb on either side.

 

ADD REPLYlink written 3.3 years ago by Zev.Kronenberg11k
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