all vs all blast result manipulation
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6.9 years ago
Eva_Maria ▴ 190

I have result of all vs all blast result of different genome in same species. how to identify orthologous groups form this out put?

sequencing genome blast alignment • 2.5k views
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Entering edit mode
6.9 years ago

You can use one of the following programs:

  1. InParanoid
  2. OrthoMCL
  3. RSD

They find orthologs between all the sequences in the query and subject genomes using BLAST results that have already been computed.

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