How to automatically retrieve Sequence Read Archive tuberculosis WGS NCBI data?
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6.8 years ago
vassialk ▴ 200

How to automatically retrieve Sequence Read Archive tuberculosis WGS NCBI data? Need to download all Belarus and Russia MDR and XDR tuberculosis WGS short reads. Thx.

sequencing bioinfor tuberculosis software • 1.4k views
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6.8 years ago

If you are ok with R, have a look at the SRAdb package. I'm not sure though if you can filter the results by country.

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thank you...........................

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