Which are the best websites, web-services, or other bioinformatics tools CRIPR/Cas9, specifically also covering plants and non-vertebrate species?
Edited to draw the connection to bioinformatics, in general, don't ask for the best tool or site in a fast evolving field, what's best depends vastly on the field of application.
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Not a bioinformatics question. Have you tried google ?
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I found crispr-era.stanford.edu for designing guide RNA, but it doesn't feature plants. I think it might be best to build or look for web tools that allow uploading your own genome data.
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