Diamond writting error

Question

[zhenghanl1020]

When I used diamond to create a DB, I always got the problem:

Error: Error writing file kegg_gene.dmnd (44631864/4040)

Has anyone know how to correct it?

[Pierre Lindenbaum]

what is diamond ?

[IsmailM]

I'm guessing: http://www.nature.com/nmeth/journal/v12/n1/full/nmeth.3176.html

Answer 1

[Chris Fields]

Maybe out of disk space? Or on a cluster?

See this issue on the DIAMOND GitHub repo.

(I have used DIAMOND on a shared file system w/o problems, but that's locally using GPFS)

[zhenghanl1020]

Thanks a lot for your reply！