Question: Diamond writting error
0
gravatar for zhenghanl1020
5.0 years ago by
China
zhenghanl10200 wrote:

when I used diamond to create a DB, I always got the problem: 

Error: Error writing file kegg_gene.dmnd (44631864/4040)

Has anyone know how to correct it?

blast • 1.3k views
ADD COMMENTlink modified 5.0 years ago by Chris Fields2.1k • written 5.0 years ago by zhenghanl10200
1

what is diamond ?

ADD REPLYlink written 5.0 years ago by Pierre Lindenbaum131k

I'm guessing: http://www.nature.com/nmeth/journal/v12/n1/full/nmeth.3176.html

ADD REPLYlink modified 12 months ago by _r_am31k • written 5.0 years ago by IsmailM110
0
gravatar for Chris Fields
5.0 years ago by
Chris Fields2.1k
University of Illinois Urbana-Champaign
Chris Fields2.1k wrote:

Maybe out of disk space? Or on a cluster?

See this issue on the DIAMOND GitHub repo.

(I have used DIAMOND on a shared file system w/o problems, but that's locally using GPFS)

ADD COMMENTlink modified 5.0 years ago • written 5.0 years ago by Chris Fields2.1k

Thanks a lot for your reply!

ADD REPLYlink written 5.0 years ago by zhenghanl10200
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