Tool: BioDSL - Bioinformatics Domain Specific Language
2
gravatar for Martin A Hansen
21 months ago by
Martin A Hansen3.0k
Denmark
Martin A Hansen3.0k wrote:

BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows. A workflow may consist of several pipelines and each pipeline consists of a series of steps such as reading in data from a file, processing the data in some way, and writing data to a new file.

BioDSL is build on the same principles as Biopieces, where data records are passed through multiple commands each with a specific task. The idea is that a command will process the data record if this contains the relevant attributes that the command can process. E.g. if a data record contains a sequence, then the command reverse_seq will reverse that sequence.

 

tool biodsl • 713 views
ADD COMMENTlink written 21 months ago by Martin A Hansen3.0k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 590 users visited in the last hour