Question: Bowtie query position
0
gravatar for ete
4.9 years ago by
ete100
Germany
ete100 wrote:

Hi,

is it possible to get not only the position of the reference strand but also of the query sequence? I know it is possible to "find" the sequence on the query but that's a not so nice solution...

Thanks 

alignment • 848 views
ADD COMMENTlink modified 4.9 years ago by Devon Ryan97k • written 4.9 years ago by ete100

Can you rephrase the question ? Position of query sequence ?

ADD REPLYlink written 4.9 years ago by geek_y11k
0
gravatar for Devon Ryan
4.9 years ago by
Devon Ryan97k
Freiburg, Germany
Devon Ryan97k wrote:

The query sequence is typically included in the SAM format, it's the 10th column.

ADD COMMENTlink written 4.9 years ago by Devon Ryan97k
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