just now by
ohtang7
▴
40
0
votes
0
replies
1
view
0
votes
0
replies
8
views
2
votes
0
replies
25
views
updated 23 minutes ago by
Ram
43k
•
written 51 minutes ago by
carlopecoraro2
★
2.5k
2
votes
2
replies
300
views
updated 1 hour ago by
Pierre Lindenbaum
161k
•
written 8 months ago by
AshleeThomson
▴
80
0
votes
1
reply
46
views
7
votes
5
replies
4.6k
views
0
votes
4
replies
74
views
5
votes
3
replies
502
views
updated 3 hours ago by
colindaven
6.4k
•
written 5 days ago by
kirillkirilenko
▴
40
0
votes
0
replies
27
views
0
votes
3
replies
296
views
0
votes
0
replies
33
views
1
vote
3
replies
130
views
0
votes
3
replies
114
views
795
votes
167
replies
141k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
1
reply
88
views
updated 5 hours ago by
Michael
54k
•
written 6 hours ago by
michael.flower.14
▴
180
0
votes
2
replies
97
views
0
votes
1
reply
45
views
updated 20 minutes ago by
bk11
★
2.3k
•
written 6 hours ago by
Susmita Mandal
▴
110
0
votes
1
reply
74
views
updated 3 hours ago by
GenoMax
141k
•
written 7 hours ago by
sarahawan92
▴
10
0
votes
3
replies
434
views
updated 7 hours ago by
atharvakarkare14
▴
10
•
written 4 days ago by
Ashok
•
0
1
vote
1
reply
87
views
0
votes
1
reply
98
views
updated 7 hours ago by
Basti
★
2.0k
•
written 10 hours ago by
qudrat.nii
▴
10
0
votes
0
replies
72
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
10 hours ago by
yxwucq
•
0
0
votes
0
replies
54
views
0
votes
0
replies
41
views
2
votes
7
replies
207
views
0
votes
5
replies
200
views
updated 16 hours ago by
Pierre Lindenbaum
161k
•
written 18 hours ago by
Sd
•
0
0
votes
2
replies
129
views
18 hours ago by
sainavyav22
•
0
0
votes
1
reply
98
views
updated 19 hours ago by
Ram
43k
•
written 20 hours ago by
Cameron.walker9900
•
0
0
votes
8
replies
230
views
1
vote
4
replies
163
views
updated 20 hours ago by
Mensur Dlakic
★
27k
•
written 20 hours ago by
Κοσμάς
•
0
0
votes
0
replies
72
views
updated 20 hours ago by
Ram
43k
•
written 20 hours ago by
maxime.policarpo
▴
200
3
votes
3
replies
137
views
0
votes
0
replies
60
views
0
votes
2
replies
117
views
19 hours ago by
dxj294
•
0
0
votes
0
replies
65
views
0
votes
0
replies
96
views
1
vote
3
replies
2.4k
views
updated 18 hours ago by
chrchang523
10k
•
written 6.1 years ago by
Ginevra
▴
10
2
votes
1
reply
107
views
updated 22 hours ago by
ATpoint
81k
•
written 23 hours ago by
catherine.teyssier
•
0
2
votes
3
replies
156
views
7 hours ago by
michelafrancesconi9
▴
20
0
votes
0
replies
68
views
1
vote
4
replies
166
views
updated 23 hours ago by
Ram
43k
•
written 23 hours ago by
marco.barr
▴
60
2
votes
3
replies
294
views
updated 23 hours ago by
dsull
★
5.8k
•
written 13 days ago by
javanokendo
▴
60
0
votes
1
reply
108
views
0
votes
2
replies
160
views
3
votes
3
replies
181
views
0
votes
2
replies
132
views
updated 20 hours ago by
Mensur Dlakic
★
27k
•
written 1 day ago by
emmanouil.a
▴
120
0
votes
1
reply
101
views
0
votes
0
replies
73
views
3
votes
3
replies
701
views
1 day ago by
david.b.rombaut
▴
10
0
votes
0
replies
64
views
Recent Votes
Recent Locations •
All
Taiwan, just now
Stony Brook University, NY, just now
Bangkok, 2 minutes ago
Russian Federation, 2 minutes ago
United States, 2 minutes ago
The Netherlands, 2 minutes ago
Karachi, 3 minutes ago
Recent Awards •
All
Popular Question to
Kash
▴
110
Popular Question to
pfee418
▴
10
Popular Question to
sarahmanderni
▴
100
Popular Question to
Michael
54k
Popular Question to
michael.flower.14
▴
180
Recent Replies
Comment: Subset Seurat object from Xenium spatial data
by
bk11
★
2.3k
For subsetting a sample, you can do something like this-
Idents(seuratObj) <- "orig.ident"
subj1 <- c("subject_1")
subj1_seur…
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
Ok! I have a recommendation. I'll submit it as an answer, pending your feedback.
vincent
Comment: DYH17 Structure Prediction
by
anasjamshed
▴
120
In modeller we need to use templates as well.so 63% is acceptable
Comment: DYH17 Structure Prediction
by
Ram
43k
Mensur said
> The latter option assumes you know how to use Modeller
Do you know how to use Modeller? I vaguely recall there being a mini…
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
by
GenoMax
141k
OP is working with long reads so the chances of reads aligning to unlocalized scaffolds are relatively small. Doing some testing may be suf…
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
by
ATpoint
81k
I personally think that comparing the same peak between conditions is meaningful and comparing peaks within the same sample is not.
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
by
ATpoint
81k
These regions are present in the genome and removing them might incorrectly redirect alignments to known genes. I don't see why you would r…
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
by
njornet
▴
20
Ok thank you! Do you know if there is an easy way of doing so with ncbi-genome-download or I need to use another tool?
Comment: Using vg gamsort with naive sorting algorithm
by
Pierre Lindenbaum
161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: Redirection of Duplicate PMIDs
by
dominickd
•
0
The scope is all publications related to grants from an NIH award program. There are currently ~120k publications in total (about a few hun…
Answer: Using vg gamsort with naive sorting algorithm
by
anovak
▴
120
The `-d` sorting mode does the entire sort in memory, so it will only work if you have enough memory to load your whole GAM file.
To fin…
Comment: Redirection of Duplicate PMIDs
by
dominickd
•
0
I have a list of PMIDs for publications linked to a list of grants, exported from NIH RePORTER.
Comment: Plot DNA methylation level of DMR on the basis of certain genes
by
Pierre Lindenbaum
161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
by
GenoMax
141k
Yes you can remove those if you are only interested in annotated genes.
Comment: Help for coding: Trinity for differential gene expression studies
by
mchour
•
0
[This could help][1]
[1]: https://github.com/trinityrnaseq/RNASeq_Trinity_Tuxedo_Workshop/wiki/Trinity-De-novo-Transcriptome-Assembly-W…
Traffic: 3338 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6