R package for GSEA
1
1
Entering edit mode
5.9 years ago
kynnjo ▴ 40

Does anyone know how to download and install the R-GSEA package?

If I try to register via

http://www.broadinstitute.org/cancer/software/gsea/software/software_index.html

...I just get a 404 error.

Is there any other source for this package?

 

R • 11k views
ADD COMMENT
3
Entering edit mode
5.9 years ago
h.mon 33k

There are several packages implementing GSEA on Bioconductor, gage and phenoTest are two examples, surely someone will point more.

ADD COMMENT
2
Entering edit mode

piano (BioConductor) is another; there are also some set statistics implemented in limma (see https://www.bioconductor.org/packages/3.3/bioc/manuals/limma/man/limma.pdf, romer, roast, camera)

ADD REPLY

Login before adding your answer.

Traffic: 2711 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6