Extracting Exon intron utr co-ordinate
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5.4 years ago
rakeshmbb • 0

Dear all,

Please kindly help me. I have a list of genes in a simple text file. I have whole genome annotation file (.gff3). Now I want to retrieve genomic co-ordinate of the UTR, Exon, intron of genes of my interest only. How can I do this.

genome gene • 1.5k views
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What language are you comfortable using? Python and R, for example, both have nice facilities for working with gff files.

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