Entering edit mode
8.4 years ago
slmbbdjqcwt
•
0
Hi
I have a problem of understand the result of tophat fusion
when I ran tophat-fusion-post and it generated result.html
result.txt
- Why tophat-fusion-post need both map to genome and nt library?
- How can I get the seq from the filter result, I know that default is 100bp from html result. But there is many reads, when I want to get more than 100bp
- I can't understand the
The seventh row is distances (distance1:distance2) between a mate pair and the fusion, i.e., distance1 between the left end of a pair and the left side of the fusion and distance2 between the right end of a pair and the right side of the fusion.The seventh row is distances (distance1:distance2) between a mate pair and the fusion, i.e., distance1 between the left end of a pair and the left side of the fusion and distance2 between the right end of a pair and the right side of the fusion.
3 pairs
31:29
89:27
65:821