Entering edit mode
8.3 years ago
cgross
•
0
Hey everyone!
For a student project we identified Shine-Dalgarno Sequences in bacterial genomes (Ecoli & H.pylori). To validate our method we now would like to apply our algorithm to a reference data set where the exact locations of SD-Sequences are annotated. Can you point us to locations where such data might be available? Some known genes with upstream regions and annotations for E.coli and if possible H.pylori might be enough .
So far we tried to find SD locations in EcoGene and RegulonDB but were not successfull.
Thanks!