Question: TCGA/Cancer Tissue RNAseq
gravatar for fk566938
3.7 years ago by
United States
fk56693810 wrote:

Hi, my PI is looking for Cancer/tumor/tissue/cell line RNAseq data preferably in BAM files. I would like to search for expression of isoform of a gene of interest in this RNAseq data. I tried using the Broad Institute's IGV TCGA server for this data but the directions on how to use the data is unclear and I am unsure if what is available on the route is even RNAseq. Does anyone know how I can get access to this type of data?

rna-seq • 1.3k views
ADD COMMENTlink modified 3.7 years ago by TriS3.9k • written 3.7 years ago by fk56693810
gravatar for TriS
3.7 years ago by
United States, Buffalo
TriS3.9k wrote:

BAM files from TCGA are restricted, you need to apply for access at the Cancer Genomics Hub

ADD COMMENTlink written 3.7 years ago by TriS3.9k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2219 users visited in the last hour