Question: TCGA/Cancer Tissue RNAseq
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gravatar for fk566938
3.7 years ago by
fk56693810
United States
fk56693810 wrote:

Hi, my PI is looking for Cancer/tumor/tissue/cell line RNAseq data preferably in BAM files. I would like to search for expression of isoform of a gene of interest in this RNAseq data. I tried using the Broad Institute's IGV TCGA server for this data but the directions on how to use the data is unclear and I am unsure if what is available on the route is even RNAseq. Does anyone know how I can get access to this type of data?

rna-seq • 1.3k views
ADD COMMENTlink modified 3.7 years ago by TriS3.9k • written 3.7 years ago by fk56693810
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gravatar for TriS
3.7 years ago by
TriS3.9k
United States, Buffalo
TriS3.9k wrote:

BAM files from TCGA are restricted, you need to apply for access at the Cancer Genomics Hub

ADD COMMENTlink written 3.7 years ago by TriS3.9k
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