The selscan need a mapfile which contains genetic distance when calculating iHS or XPEHH. But how to
deal with non-model species without genetic map?
Try to approximate 1Mb = 1 cM. We did this for cattle...
Thank you. I also have thought about making a fake genetic distance according to physic map. But will it make any difference to the result?
Is there any other solution? such as by calculating recombination rate.
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