Question: Can we use the index file created for Bowtie on BWA alignment?
0
gravatar for Amk
3.1 years ago by
Amk120
Amk120 wrote:

Hi All,

It's due to a curiosity, Can we use the index files created by Bowtie can be used for BWA for mapping? I am new to the genomics field, Please do consider as a noob question.

Thank you.
Amk

index bowtie bwa • 1.1k views
ADD COMMENTlink modified 3.1 years ago by Devon Ryan88k • written 3.1 years ago by Amk120
2
gravatar for Devon Ryan
3.1 years ago by
Devon Ryan88k
Freiburg, Germany
Devon Ryan88k wrote:

No, they have different formats.

ADD COMMENTlink written 3.1 years ago by Devon Ryan88k

Thank you Devon

ADD REPLYlink written 3.1 years ago by Amk120
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