I am looking for a website/article/book/resource/anything that will help me learn "genome assembly" from scratch, step-by-step on a given dataset.
Any help would be highly appreciated.
This came to my mind immediately. http://www.homolog.us/Tutorials/index.php?p=1.4&s=1
There could be other great review/methods papers.
There is one course in courser that is called Algorithms for DNA Sequencing. When I was writing my alignment code, It helped me pretty much. You may look for it.
Ho to apply de Bruijn graphs to genome assembly. A very well written review. Worth the read.
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