I'm wondering whether there is a program that could calculate chromosome sizes from any fasta file? The idea is to generate a tab file like the one expected in bedtools genomecov for example.
I know there's the fetchChromSize program from UCSC, but not all genomes are available over there (I need TAIR10 for instance). I've read this topic already.
I would like a tool that can deal with any genome regardless of the database. If it doesn't exist I guess it's possible to just parse fasta files, but I'd be surprised if no one else had done it before!