Question: Ensembl IDs to Entrez IDs and Entrez symbol.
gravatar for carol.dmonteiro
2.5 years ago by
carol.dmonteiro0 wrote:


I have a big list of ensembl gene IDs I need to convert it to Entrez IDs and symbol. I did try using biomart but it did not return any of the psudogene IDs that I know map to Entrez.

Also my input had about 18000 ensembl IDs and the output only had 15000, even if there is no corresponded Entrez shouldn't I still get all my ensembl Ids back.

So how can I get the list of genes and pseudogenes?




rna-seq forum ensembl • 3.3k views
ADD COMMENTlink modified 2.5 years ago by Biostar ♦♦ 20 • written 2.5 years ago by carol.dmonteiro0
gravatar for Tanvir Ahamed
2.5 years ago by
Tanvir Ahamed 270 wrote:

After a quick search. Could be helpful 

Biomart Bioconductor - Retrieving All Entrezgenes Of Hsapiens_Gene_Ensembl

ADD COMMENTlink written 2.5 years ago by Tanvir Ahamed 270
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