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  Hello I am trying to convert TCGA MAF file to VCF using maf2vcf.pl The MAF file with build GRCh...
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  Hi, I am working on exome data from tcga. I downloaded it in .maf format and want to convert it ...
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• annotating MAF files
  I've read quite a few posts on this forum on MAF files: https://www.biostars.org/p/69222/ and ht...
• TCGA SNP to plink
  Hello everyone I want to convert from TCGA SNP to PLINK. Can anyone suggest here 1. I download...
• TCGA maf to vcf file conversion
  Hello All, I want to convert TCGA MAF to VCF analysis with PLINK I worked on the conversion of M...
• TCGA VCF & MAF content
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• Tool or Script to convert MAF file to VCF ?
  Hi, Does anybody know of any script/tool which could convert a MAF file to VCF ? https://wiki.n...
• GRCh37/hg19 human genome sequences from NCBI
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• TCGA Birdseed vs MAF vs VCF
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• Converting Vcf File To Maf
  I have a vcf file generated by in-house variant calling pipeline, containing both coding and non-...
• Consolidated MAF file for all cancers in TCGA
  Hi I want a consolidated MAF file for all cancers from TCGA data. Is it correct to use the MAF ...
• Maf to VCF file convertion, offline_cache not downloading
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• ncRNA gencode files
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• How to download dbSNP153 vcf files in hg19/GRCH37 version
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• Broad Institute TCGA MAF procedure
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• Convert BED(UCSC) to VCF
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• Vcf To Maf (Mutation Annotation Format) Conversion ?
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• how to extract mutation from MAF file in python
  I just downloaded data from tcga and GDC . I have two files , one is anotation.txt and other is ....
• Is GRCh37 and hg19 are the same?
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• vcf to MAF to fasta
  Dear all, A strange idea has came to my mind recently. There is no direct way to convert vcf in...
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  Hi, I have 40 raw vcf files and I was able to convert all these 40 vcf files to 40 individual m...
• How to convert vcf to MAF ?
  I'm interested in converting vcf to MAF, I found 2 scripts 1) perl vcf to maf Its ask for a EX...