Question: How to obtain gene signature of a gene X from TCGA expression-gene data set at level 3. And how to obtain status of a particular mutation of X from such a signature of gene X?
gravatar for thwbi09
4.1 years ago by
thwbi090 wrote:

I am pretty much new to this area. I have downloaded gene expression data and MAF for a particular cancer type at level 3 and level 2 respectively from TCGA. I just want to check the signature of a particular gene X from the dataset and also check the mutation signature for the same gene X. What pipeline one should follow in such a case?

ADD COMMENTlink written 4.1 years ago by thwbi090
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1030 users visited in the last hour