What is the best and fast way to acess query coverage from tBLASTn Local on windows?

Question

[soza]

I was using the UGENE but it cant provide the query coverage yet. Do you guys know another tool that can provide this info?

Thanks!

Answer 1

[h.mon]

Use command-line Blast with -outfmt, see this thread here, the NCBI Blast manual here, or tblastn -help

[soza]

do you know what outfmt can provide this info? there is a lot of options