Question: Analyzing proteomics data
0
gravatar for Mamta
3.8 years ago by
Mamta450
United States
Mamta450 wrote:

Hi All,

I am analyzing a proteomics adatset on 7 different disease group. and would like to check for proteins which might be present for absent in one specific group when compared to the others. Is there a way/tool anyone is familiar with that I can use/work with

It SILAM quantitative proteomics dataset run on QE machine and normalized using MAXquant software.

Thanks in adavnce!!!

Mamta

disease-specific proteomics • 1.0k views
ADD COMMENTlink modified 3.8 years ago by Benn7.9k • written 3.8 years ago by Mamta450

You should mention what kind of proteomics dataset are you working with, it's a vast field. More details mostly never harm :)

ADD REPLYlink written 3.8 years ago by Sukhdeep Singh9.9k

Hi Mamta, We can help you for your analysis. Can you please more information on this? Let us understand if our platform http://bioelm.com can help on this.

Thanks.

ADD REPLYlink written 3.8 years ago by aeinsights20
0
gravatar for Benn
3.8 years ago by
Benn7.9k
Netherlands
Benn7.9k wrote:

I use limma for statistical analysis of maxquant normalized (label free ms) data. Make contrasts with a control group if you have it.

ADD COMMENTlink written 3.8 years ago by Benn7.9k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1037 users visited in the last hour