Off topic:Keep duplicate cuffdiff gene names when converting to AGI

Question

[zizigolu]

hi, in cuffdiff output i have 32394 genes for sample C1 and C2 but when i converted them to AGI in biomart i have only 20562 AGI because I saw some genes were repeated in cuffdiff output between sample C1 and C2. then how I can have 32394 AGI???? because it is too difficult even i don't know how to match these IDs...