Generating realistic ABI/AB1 electropherograms for educational purposes
0
0
Entering edit mode
8.1 years ago
jnf3769 ▴ 40

I was wondering if anyone knew of a method by which to generate electropherograms or abi/abi files for a lab I am teaching. The only reason why I am looking for a slightly more realistic way is because the lab is behind schedule due to some issues with the sequencer. I want the students to use software to interpret the abi, align some sequences, and design their own internal primers for use later in the lab. I have the true sequence as a series of ABI/AB1 files already, but I'd like to introduce some errors/variation in the electropherogram.

Anyone have any clues or ideas? I am pretty familiar with R/Bioconductor, Java, and python, if that helps.

Thank you for your time!

AB1 Abi Electropherogram sequencing Education • 2.3k views
ADD COMMENT

Login before adding your answer.

Traffic: 3231 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6