Question: Time To Upload A Bigwig File With Around 12.55 Gb
0
gravatar for Hamilton
7.5 years ago by
Hamilton260
Hamilton260 wrote:

I am uploading a big wig file generated from MACS peak caller, the file size is 12.55 GB. It is running now. btw, I wonder if it will be eventually uploaded or not as it is a huge size. IGV is run with even such a huge wig file. how about ucsc genome browser?

This is a mac computer with processor 2x2.93 GHz 6 core intel and 64GB 1333 MHz DDR3.

what is the limitation of bigwig file size? How long does it take to get the result approximately?

Anyone comments?

genome wiggle • 1.6k views
ADD COMMENTlink written 7.5 years ago by Hamilton260

See David's answer below. You should not expect uploading a 12.55GB file to work.

ADD REPLYlink written 7.5 years ago by Sean Davis25k
2
gravatar for David Langenberger
7.5 years ago by
Deutschland
David Langenberger9.0k wrote:

You don't have to upload the file. You can just make it accessible via ftp, or http and tell UCSC where to access it.

You can find a description at the UCSC-FAQs: http://genome.ucsc.edu/goldenPath/help/bigWig.html

ADD COMMENTlink modified 7.5 years ago • written 7.5 years ago by David Langenberger9.0k
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