Data resources for Chromatin accessibility (DNAse, FAIRE, ATAC - seq) and Transcriptomics (RNA-seq, expression profilling)
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6.9 years ago

I know following resources which have DNAse-seq and mRNA-seq data for different tissue/cell samples. If you know some other studies or resources, then kindly share that information:

  1. ENCODE (https://www.encodeproject.org/search/?type=Experiment)

  2. Roadmap (http://www.roadmapepigenomics.org/data/tables/all)

Chromatin Accessibility Transcriptomics • 2.9k views
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6.1 years ago
apa@stowers ▴ 580

You are basically looking for a public repository (google "sequencing public repository", for instance)

Here are a few more big ones which handle next-gen sequencing data:

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