Hi,guys~Need your help. I got tens of thousands of protein seqs. Because they're from a rare organism and have too many seqs, DAVID and web-based blast2go are unsuitable. I tried Interpro scan,then a xml file was given. In this xml, each protein ID contains several GO IDs. Now I wanna do some GO analysis based on it(eg,keep the lowest go terms and do enrichment analysis,may need some statistical charts .And it would be great if can get EC for kegg). I once tried this xml with "Import interpro xmls" from blast2go interface,but nothing happened. Could you plz give me some clue for how to deal with this xml?A program/soft suite or perl module will be fine. Or other way to do GO/kegg analysis without interpro results? Thanks a lot!
Question: How To Do Go Analysis Via Interpro Results?
7.2 years ago by
Casual • 90
Casual • 90 wrote:
ADD COMMENT • link •
Please log in to add an answer.
Powered by Biostar version 2.3.0
Traffic: 1060 users visited in the last hour