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• a question about sharing the ucsc custom track to other people
  Hi all, I have a question when I creating the UCSC custom tracks and want to share it to other p...
• How To Intersect Two Tracks In Ucsc Table Browser And Get Fields From Both?
  In the UCSC Table browser, I'm trying to intersect a custom track (with genomic coordinates and a...
• Adding Custom Bed And Bam Tracks To UCSC Browser By URL
  I'm trying to add custom tracks to a UCSC genome browser session. I can add BAM files as follows:...
• How to understand data in custom track of ucsc genome browsers
  Hi everyone, I am looking at these custom tracks for whole genome sequence of a zebra on ucsc ge...
• Genome Browser and Custom Tracks
  Bio Guys, Does anyone know how to display variant information on the genome browser that displays...
• UCSC browser track description can't be updated
  Hi, After uploading a custom track to the UCSC browser, you can update the track line: change th...
• uploading data in UCSC Microbial genome browser
  Hi I have *_sorted.bam file (prokaryotic/RNA seq) which i want to upload from my local machine (...
• How to upload a custom genome build at Galaxy
  Hi I have created a new “custom build” at Galaxy from a fasta file, formatting it according to th...
• Link UCSC genome browser session with custom tracks
  Stupid question: I want to make links for specific loci with the saved settings of a sharable UC...
• bigwig file in UCSC custom track
  Hi I had a wiggle file in mm9 format. I converted it to bedgraph and using UCSC liftovered it to...
• visualizing the file with BigWig format
  Hello I am trying to visualize my Bigwig file with UCSC or IGV, about UCSC I don't know any abou...
• Inverse Of An Annotation Track In Bed Format?
  Hi there, I am hoping to get some help with the following problem. I am trying to compare tw...
• How Best To Add Custom Variation Track To Ucsc Browser?
  I have generated sequence variants (SNPs/INDELs) by NGS resequencing and would like to display th...
• UCSC custom track, don't want to display "Exon(1/1)"
  Hi, I'm making a UCSC custom track to display my CNVs, using different colors for different typ...
• How To Create 'Grass-Like' Graphs (Barcharts) In Ucsc Browser Tracks?
  Some of the tracks in the UCSC browser are shown as spiky or 'grass-like' charts: I can not fi...
• UCSC Custom Track download
  I'm trying to create a new Custom Track for UCSC, but I'm not sure exactly how to do it.   I've...