Question: problem compiling discoSnp++ make: *** No targets specified and no makefile found
0
gravatar for hugo.v
3.3 years ago by
hugo.v10
Thailand
hugo.v10 wrote:

Hello: I am trying to install discoSnp++ version 2.2.4. I downloaded the source code (link to the binaries was not able to download them) and followed the apparently very straightforward installation process.

~/DiscoSNP++-2.2.4-Source $ ./compile_discoSnp++.sh Compiling discoSnp, from directory /home/hugo/DiscoSNP++-2.2.4-Source ./compile_discoSnp++.sh: line 39: cmake: command not found make: * No targets specified and no makefile found. Stop.

I have LinuxMint 17.2 installed as operating system with gcc version 4.8.4 (Ubuntu 4.8.4-2ubuntu1~14.04)

a "build" folder was created in the DiscoSNP++-2.2.4-Source folder, but nothing was placed in that folder.

I hope this problem can be solved. Thanks a lot in advance.

discosnp++ installation • 1.4k views
ADD COMMENTlink modified 21 months ago by lemanuel.green0 • written 3.3 years ago by hugo.v10
2
gravatar for edrezen
3.3 years ago by
edrezen720
France
edrezen720 wrote:

Hello,

DiscoSNP++ requires that the cmake tool is installed on your machine (see the trace "cmake: command not found")

You have to install cmake first before building DiscoSNP++.

ADD COMMENTlink written 3.3 years ago by edrezen720
0
gravatar for lemanuel.green
21 months ago by
lemanuel.green0 wrote:

Hello everybody, I face the same problem. I have installed Cmake, but it doesnt work. Is there a test, to be sure that Cmake is installed properly ? Thank you for your help Manu

ADD COMMENTlink written 21 months ago by lemanuel.green0

Perhaps try installing with conda: https://anaconda.org/bioconda/discosnp

ADD REPLYlink written 21 months ago by WouterDeCoster40k

2.6 version is in ubuntu/mint repos. use apt-get or synaptic to install.

ADD REPLYlink written 21 months ago by cpad011211k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1301 users visited in the last hour