I'm currently extracting a list of k-mers from a FastQ file, using jellyfish. In addition to the k-mers, I would also like a list of all the sequence ids (which are actually the id of the MiSeq reads) for each k-mer.
Is this something jellyfish is capable of doing? Unfortunately, couldn't find any description for that in the docs.
If not, is there a tool that is able to perform this task?