Entering edit mode
12.1 years ago
Yangyongzhi
•
0
1.command:
./maq map result.map -1 127 -2 127 -i 100 -a 700 \
~/projects/ku/test_maq/New/scaffold101_1.bfa \
~/projects/ku/test_maq/New/7_1_1_1.bfq \
~/projects/ku/test_maq/New/7_1_1_2.bfq
2.The program runs like this:
-- maq-0.7.0
[ma_load_reads] loading reads...
[ma_load_reads] 0*2 reads loaded.
[ma_longread2read] encoding reads... 0 sequences processed.
[ma_match] set the minimum insert size as 128.
[match_core] Total length of the reference: 919106
[match_core] round 1/3...
[match_core] making index...
[match_index_sorted] no reasonable reads are available. Exit!
ps: before this,what i have done :
maq fasta2bfa .....scaffold101_1.fa
maq fastq2bfq .....7_1_1_1.fq
maq fastq2bfq .....7_1_1_2.fq