Sequencing parameters in methods section
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8.1 years ago
acorella ▴ 30

Hi,

I was wondering if you could help me interpet a methods section on a paper. The author's say they collected data using "34 × 8 × 34 reads from a MiSeq or 50 × 8 × 50 reads on a HiSeq"

What do each of those numbers refer to? Are they read length, flow cell lanes, and cycles?

Thank you!

sequencing • 1.3k views
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8.1 years ago
GenoMax 141k

They are read lengths/number of sequencing cycles. R1=34 bp R2=34 bp (for MiSeq example). The number in the middle is the length of the tag/barcode read.

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