Question: Poster quality images of gapped read alignment
0
gravatar for onspotproductions
3.0 years ago by
United States
onspotproductions130 wrote:

I am looking for a tool to generate High-resolution images of alignment files out of star or tophat for use to represent alignment quality, number of reads mapped etc. I want to include these on posters for presentation. I believe I have previously encountered a tool that generates something similar to FastQCs tile quality image, but am unsure the name of it.

images rna-seq tophat graphics • 844 views
ADD COMMENTlink modified 3.0 years ago by WouterDeCoster38k • written 3.0 years ago by onspotproductions130
0
gravatar for WouterDeCoster
3.0 years ago by
Belgium
WouterDeCoster38k wrote:

Could it be RSeqQC https://code.google.com/archive/p/rseqc/?

ADD COMMENTlink written 3.0 years ago by WouterDeCoster38k

I tried it before, but was not able to compile it due to a clang error on OSX. Any other recommendations?

ADD REPLYlink written 3.0 years ago by onspotproductions130
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 934 users visited in the last hour