Question: Poster quality images of gapped read alignment
0
gravatar for onspotproductions
3.6 years ago by
United States
onspotproductions140 wrote:

I am looking for a tool to generate High-resolution images of alignment files out of star or tophat for use to represent alignment quality, number of reads mapped etc. I want to include these on posters for presentation. I believe I have previously encountered a tool that generates something similar to FastQCs tile quality image, but am unsure the name of it.

images rna-seq tophat graphics • 921 views
ADD COMMENTlink modified 3.6 years ago by WouterDeCoster41k • written 3.6 years ago by onspotproductions140
0
gravatar for WouterDeCoster
3.6 years ago by
Belgium
WouterDeCoster41k wrote:

Could it be RSeqQC https://code.google.com/archive/p/rseqc/?

ADD COMMENTlink written 3.6 years ago by WouterDeCoster41k

I tried it before, but was not able to compile it due to a clang error on OSX. Any other recommendations?

ADD REPLYlink written 3.5 years ago by onspotproductions140
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