Question: Given "Mrna Accession", "Start Position In Mrna", "End Position In Mrna", "Reference Nucleotide" And "Missense Nucleotide", How Can I Create Annovar Generic Format?
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7.9 years ago by
jessada110
jessada110 wrote:

I this to create input file in annova generic format from VariBench. In short, in VariBench dataset, they have "mRNA accession", "start position in mRNA", "end position in mRNA", "reference nucleotide" and "missense nucleotide". Are there any ways to parse them? Other than using refGene from

annotate_variation.pl -downdb -buildver hg19 refGene humandb

annovar ucsc • 1.6k views
ADD COMMENTlink written 7.9 years ago by jessada110
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