Psi-blast result parsing problem

Question

[Xylanaser]

Hey, i have problem a long time... Can u give me advice how to parse xml data from standalone psiblast? I'm trying with biopython.... and blastorage module but im totally beginner.

or maybe older version of standalone blast without xml files is the answer?

Regards Xylanaser

[Ram]

Have you tried using Bio.Blast.Record?

1. http://biopython.org/DIST/docs/api/Bio.SearchIO-module.html
2. http://biopython.org/DIST/docs/api/Bio.Blast.Record-module.html

[Xylanaser]

No i check it. Thanks :x

[Xylanaser]

Ok i think i will create a filter-script for text data and see what next :)