Question: What software was used to produce Figure 1 of this manuscript
gravatar for Vincent Laufer
3.0 years ago by
Vincent Laufer1.0k
United States
Vincent Laufer1.0k wrote:

From pubmed:

If I can figure out the software, I should be able to do the rest on my own. What I really like is overlaying the LD matrix with the association p-value vs chromosomal position plot. Therefore, I would also be interested in other packages that do this.

Lastly, if anyone has code to do this, I would be very thankful, but my first priority is just to find software options.

Edit: searching on my own revealed snp.plotter R package as the likely source of this, can anyone confirm that? Another package that might work for me is the locuszoom standalone. Are there other options I should know about?

ADD COMMENTlink modified 3.0 years ago • written 3.0 years ago by Vincent Laufer1.0k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1498 users visited in the last hour