Combing multiple fasta files into one fasta for performing alignment
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8.0 years ago

I have 2504 cds sequences in a fasta format which I want to combine into a single fasta file and run the alignment on them !

Help Required !!!!!!

sequencing • 3.6k views
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8.0 years ago

Assuming your files have an common suffix (i.e 1.fasta, 2.fasta, 3.fasta...)

cat *.fasta > total.fasta

Then you can run the program of your interest (ClustalW, etc..)

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