Question: Combing multiple fasta files into one fasta for performing alignment
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gravatar for mohammedabeddin1
3.5 years ago by
mohammedabeddin110 wrote:

I have 2504 cds sequences in a fasta format which I want to combine into a single fasta file and run the alignment on them !

Help Required !!!!!!

sequencing • 2.1k views
ADD COMMENTlink modified 3.5 years ago by Antonio R. Franco4.1k • written 3.5 years ago by mohammedabeddin110
1

A: Multiple sequence alignment

ADD REPLYlink written 3.5 years ago by genomax73k
1
gravatar for Antonio R. Franco
3.5 years ago by
Spain. Universidad de Córdoba
Antonio R. Franco4.1k wrote:

Assuming your files have an common suffix (i.e 1.fasta, 2.fasta, 3.fasta...)

cat *.fasta > total.fasta

Then you can run the program of your interest (ClustalW, etc..)

ADD COMMENTlink modified 3.5 years ago • written 3.5 years ago by Antonio R. Franco4.1k
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