Question: Summary statistics problem
0
gravatar for kon.klaourakis
3.0 years ago by
kon.klaourakis0 wrote:

Hello,

I have a problem with summary statistics. I put as an input either bed file from MACS2 or tabular again from MACS2 and there is always this error:

Traceback (most recent call last): File "/cvmfs/main.galaxyproject.org/galaxy/tools/stats/gsummary.py", line 10, in <module> from rpy import BASIC_CONVERSION, NO_CONVERSION, r, RException, set_default_mode ImportError: No module named rpy

Any idea why this is happening? (I am just getting familiar with Galaxy these 2 weeks)

Thank you very much for your time,

Konstantinos Klaourakis

chip-seq software error • 778 views
ADD COMMENTlink written 3.0 years ago by kon.klaourakis0

It appears that your galaxy server is missing rpy/rpy2 python module. You will have to contact galaxy admins for getting that fixed.

ADD REPLYlink written 3.0 years ago by genomax65k
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