Question: How To Remove Contamination From Ngs 454 Sequencing Data
1
gravatar for Amit
7.4 years ago by
Amit10
Amit10 wrote:

hi

i am new in the field of ngs data analysis and want to learn about that. i have some 454 sequencing reads but that contains mixed and contaminated sequenced reads from source and repeats that i want to remove or partition them. please suggest me any solution if anyone knows.

thank you in advance.

data next-gen analysis • 2.5k views
ADD COMMENTlink written 7.4 years ago by Amit10
1
gravatar for SES
7.4 years ago by
SES8.2k
Vancouver, BC
SES8.2k wrote:

You can use DeconSeq, as it was specifically designed for removing contamination from 454 reads.

ADD COMMENTlink written 7.4 years ago by SES8.2k
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