Question: blastn in blast+ suite error
0
gravatar for linhuixinnn
3.1 years ago by
linhuixinnn0 wrote:

hi,

i am trying to align locally the de novo assembled contigs against the nr database using the blastn program in blast+ suite for annotation purpose. however i received this error that i cant find a solution:

$ /Volumes/1TB\ HDD/Transcriptomes\ Work/ncbi-blast-2.2.26+/bin/blastn -query WT.fa -db chlorophyta -out WT_chlorophyta -evalue 0.0001 -outfmt 6
Critical: (110.6) CNcbiRegistry: Syntax error in system-wide configuration file: NCBI C++ Exception:
    "/am/ncbiapdata/release/blast/src/2.2.26/IntelMAC-universal/c++/GCC401-ReleaseMT--IntelMAC-universal/../src/corelib/ncbireg.cpp", line 605: Error: ncbi::IRWRegistry::x_Read() - Invalid registry entry format: '“[BLAST]”' (m_Pos = 1)

Error: NCBI C++ Exception:
    "/am/ncbiapdata/release/blast/src/2.2.26/IntelMAC-universal/c++/GCC401-ReleaseMT--IntelMAC-universal/../src/corelib/ncbireg.cpp", line 605: Error: ncbi::IRWRegistry::x_Read() - Invalid registry entry format: '“[BLAST]”' (m_Pos = 1)

please kindly advise. thank you.

blast alignment • 1.1k views
ADD COMMENTlink modified 3.1 years ago by genomax67k • written 3.1 years ago by linhuixinnn0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1023 users visited in the last hour