WGNCA RNASeq without time series
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5.7 years ago
debitboro ▴ 220

Hi all,

I'm new in using WGCNA. I have RNASeq data without time series (just tumor vs normal tissues, let's say 2 conditions). I have already done the DESeq2 normalization. Now, my question is: Can I use WGCNA on my data even without time series ?

any idea, guidance, or suggestion ?

RNA-Seq WGCNA time series • 1.7k views
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You don't need a time series for running WGCNA.

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5.7 years ago

As said by chris you don't need time series, you just need numeric or categoric trait info to perform correlation with.

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