Entering edit mode
8.0 years ago
phuongthaod04
•
0
Hi,
I am new in bio field so my knowledge is not deep enough to sold this question. Please give me a help.
I have a data of more than 2000 individuals with 70 SNPs typed, containing missing values.
I would like to fill these missing values in only such 70 SNPs, using reference data.
My question is should I need to phase it with SHAPEIT, and then impute the data using IMPUTE2
OR
I just need to phase it using SHAPEIT, because the SNPs already typed and I don't need other untyped SNPs.
Thank you!
Viola