I have two small questions:
1. Which functionality is missing in your bio-programs and what you would like to have (any small or big feature)?
2. What is the most annoying feature in the bio-software you are using (besides of price :)).
The only place I ever see "bio-program" written is in these sorts of threads, and my washing machine.
I am glad to hear that you expend your knowledge.
If I could find a program which could take care of my wet lab work, well, that would be great.
..and to avoid disappointment with unexpected results there :)
Here is my number 2: "The source code being not available"
Cannot agree more, open source is a minimum requirement.
I prefer to know (and to modify if needed) how a lool works too.
If you have a mimute - see my lib for C++ CBioInfCpp - maybe smth may be useful or you have an idea what function may be added.
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