Question: Homer known motif analysis
gravatar for pinky_pinkpinky
3.7 years ago by
pinky_pinkpinky50 wrote:

Dear Users, I am intetested in identification of known motifs for my peaks generated using homer. I used homer for peak calling as well as motif generation. I got both the known and de novo motifs.But most of my required motifs are available in knownmotif.txt file.and known.motifs contains only the highly enriched one. So if I want all the known motifs represented in .txt format with low entlrichment into known .motifs how should I do so in Homer? Inputs will be highly appreciated. Thanks

chip-seq • 2.0k views
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