Question: Where Can I download Less Common Genomes?
0
gravatar for dec986
4.6 years ago by
dec986240
United States
dec986240 wrote:

Hello,

I've been using UCSC for a while now, but I would like two genomes which I can index which are not on UCSC, specifically mycoplasma and porcine masta adenovirus 5. I'd like to download the fasta files, like mm10.fa.

I cannot find these in Google searches.

-Thanks :)

download rna-seq fasta genome • 916 views
ADD COMMENTlink modified 4.6 years ago • written 4.6 years ago by dec986240
3
gravatar for Jean-Karim Heriche
4.6 years ago by
EMBL Heidelberg, Germany
Jean-Karim Heriche24k wrote:

What about GenBank ? Here is Mycoplasma pneumoniae M129 and here porcine adenovirus 5.

ADD COMMENTlink written 4.6 years ago by Jean-Karim Heriche24k
2
gravatar for Denise CS
4.6 years ago by
Denise CS5.1k
UK, Hinxton, EMBL-EBI
Denise CS5.1k wrote:

Try Ensembl Bacteria for Mycoplasma pneumoniae M129. This is the DNA fasta file for M. pneumoniae. Additional files are also available on their FTP.

ADD COMMENTlink written 4.6 years ago by Denise CS5.1k
1
gravatar for dec986
4.6 years ago by
dec986240
United States
dec986240 wrote:

Thank you Jean-Karim Heriche and Denise - Open Targets very much, this is exactly what I was looking for!

ADD COMMENTlink written 4.6 years ago by dec986240
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