Question: How to use SNPtest and QCtool
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gravatar for yjxzxq
2.3 years ago by
yjxzxq0
yjxzxq0 wrote:

Dear, I just received the imputed data which include the info, info by samples, haps, allele probes and main output. I am a newer of GWAS, I know I should use the QCtool and snptest to do the association. Do any could give me some advise how to do by QCtool and snptest. by the way, the data are gz compressed, Do I need to extract them before analysis. If extracted, I file would be exposed. Best regards. Jason

snp • 1.4k views
ADD COMMENTlink modified 6 months ago by ccolmenares0 • written 2.3 years ago by yjxzxq0
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gravatar for ccolmenares
6 months ago by
ccolmenares0 wrote:

Hi! I'm just wondering, could you figured it out how to use SNPtest? I 'm trying to use it as well. Let me know, Thanks!

ADD COMMENTlink written 6 months ago by ccolmenares0
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