Question: Empty VCF file returned by ANNOVAR on Galaxy
0
gravatar for arvand.akbari
2.9 years ago by
arvand.akbari0 wrote:

Hi,

I have a VCF file which I need to annotate through ANNOVAR. But when I use the ANNOVAR tab provided by galaxy the result is a completely empty VCF file. Can someone please explain why this happens and what I should do?

P.S: I am not familiar with linux so I cannot use ANNOVAR directly,. Thus, I have to use it through galaxy.

Arvand

ADD COMMENTlink modified 2.9 years ago by Jennifer Hillman Jackson370 • written 2.9 years ago by arvand.akbari0
1

Please ask this on the Galaxy support site.

ADD REPLYlink written 2.9 years ago by Devon Ryan90k
1
gravatar for Jennifer Hillman Jackson
2.9 years ago by
Bay Area, CA
Jennifer Hillman Jackson370 wrote:

Reply https://biostar.usegalaxy.org/p/18107/

ADD COMMENTlink written 2.9 years ago by Jennifer Hillman Jackson370
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