Empty VCF file returned by ANNOVAR on Galaxy
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5.4 years ago

Hi,

I have a VCF file which I need to annotate through ANNOVAR. But when I use the ANNOVAR tab provided by galaxy the result is a completely empty VCF file. Can someone please explain why this happens and what I should do?

P.S: I am not familiar with linux so I cannot use ANNOVAR directly,. Thus, I have to use it through galaxy.

Arvand

genome next-gen sequencing ANNOVAR Galaxy • 2.3k views
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Please ask this on the Galaxy support site.

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