Question: vcftool negative relatedness values for family members
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gravatar for marcusanaymik
3.0 years ago by
United States
marcusanaymik10 wrote:

I have ran the vcftools relatedness2 analysis on a few families data and some families produce positive relatedness phi scores and some families produce negative phi scores. In the range of + or - [0.1 - 0.3] for child-parents. Is the + - irrelevant?

vcftools qc kinship pedigree • 1.1k views
ADD COMMENTlink modified 4 months ago by Biostar ♦♦ 20 • written 3.0 years ago by marcusanaymik10

Hi Marcus,

Did you ever find out if the + - is irrelavent? I'm wondering the same thing!

Thanks,

Caragh

ADD REPLYlink written 14 months ago by Caragh 40
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