Is there any good GWAS software for the whole bacterial genomes? Input should be sam/bams, annotations, vcfs, in other words --- the outputs of alignment and variant calling and information belonging to the host (drug resistance status, clinical and laboratory parameters). Thx.
Question: Is there any good GWAS software for the whole bacterial genomes?
2.9 years ago by
hrenchert747 • 50
hrenchert747 • 50 wrote:
ADD COMMENT • link •
2.8 years ago by
natasha.sernova • 3.4k
natasha.sernova • 3.4k wrote:
See these posts:
Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriology
Explaining microbial phenotypes on a genomic scale: GWAS for microbes
Please log in to add an answer.
Powered by Biostar version 2.3.0
Traffic: 1841 users visited in the last hour